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74 <h2 class="title">C</h2>
76 <dt><span class="memberNameLink"><a href="../edu/uci/iotproject/comparison/seqalignment/SequenceAlignment.html#calculateAlignment-ALIGNMENT_UNIT:A-ALIGNMENT_UNIT:A-">calculateAlignment(ALIGNMENT_UNIT[], ALIGNMENT_UNIT[])</a></span> - Method in class edu.uci.iotproject.comparison.seqalignment.<a href="../edu/uci/iotproject/comparison/seqalignment/SequenceAlignment.html" title="class in edu.uci.iotproject.comparison.seqalignment">SequenceAlignment</a></dt>
78 <div class="block">Calculates the cost of aligning <code>sequence1</code> with <code>sequence2</code>.</div>
80 <dt><span class="memberNameLink"><a href="../edu/uci/iotproject/analysis/PcapPacketPair.html#centroidOf-java.util.Collection-">centroidOf(Collection<PcapPacketPair>)</a></span> - Method in class edu.uci.iotproject.analysis.<a href="../edu/uci/iotproject/analysis/PcapPacketPair.html" title="class in edu.uci.iotproject.analysis">PcapPacketPair</a></dt>
82 <dt><a href="../edu/uci/iotproject/detection/ClusterMatcherObserver.html" title="interface in edu.uci.iotproject.detection"><span class="typeNameLink">ClusterMatcherObserver</span></a> - Interface in <a href="../edu/uci/iotproject/detection/package-summary.html">edu.uci.iotproject.detection</a></dt>
84 <div class="block">Interface used by client code to register for receiving a notification whenever an <a href="../edu/uci/iotproject/detection/AbstractClusterMatcher.html" title="class in edu.uci.iotproject.detection"><code>AbstractClusterMatcher</code></a>
85 detects traffic that matches an element of its associated cluster.</div>
87 <dt><span class="memberNameLink"><a href="../edu/uci/iotproject/util/PcapPacketUtils.html#clusterToListOfPcapPackets-org.apache.commons.math3.stat.clustering.Cluster-">clusterToListOfPcapPackets(Cluster<PcapPacketPair>)</a></span> - Static method in class edu.uci.iotproject.util.<a href="../edu/uci/iotproject/util/PcapPacketUtils.html" title="class in edu.uci.iotproject.util">PcapPacketUtils</a></dt>
89 <div class="block">Transform a <code>Cluster</code> of <code>PcapPacketPair</code> objects into a <code>List</code> of <code>List</code> of
90 <code>PcapPacket</code> objects.</div>
92 <dt><span class="memberNameLink"><a href="../edu/uci/iotproject/util/PcapPacketUtils.html#concatSequences-java.util.List-java.util.List-">concatSequences(List<List<List<PcapPacket>>>, List<Conversation>)</a></span> - Static method in class edu.uci.iotproject.util.<a href="../edu/uci/iotproject/util/PcapPacketUtils.html" title="class in edu.uci.iotproject.util">PcapPacketUtils</a></dt>
94 <div class="block">Concatenate sequences in <code>List</code> of <code>List</code> of <code>List</code> of <code>PcapPacket</code> objects.</div>
96 <dt><a href="../edu/uci/iotproject/trafficreassembly/layer3/Conversation.html" title="class in edu.uci.iotproject.trafficreassembly.layer3"><span class="typeNameLink">Conversation</span></a> - Class in <a href="../edu/uci/iotproject/trafficreassembly/layer3/package-summary.html">edu.uci.iotproject.trafficreassembly.layer3</a></dt>
98 <div class="block">Models a (TCP) conversation/connection/session/flow (packet's belonging to the same session between a client and a
101 <dt><span class="memberNameLink"><a href="../edu/uci/iotproject/trafficreassembly/layer3/Conversation.html#Conversation-java.lang.String-int-java.lang.String-int-">Conversation(String, int, String, int)</a></span> - Constructor for class edu.uci.iotproject.trafficreassembly.layer3.<a href="../edu/uci/iotproject/trafficreassembly/layer3/Conversation.html" title="class in edu.uci.iotproject.trafficreassembly.layer3">Conversation</a></dt>
103 <div class="block">Constructs a new <code>Conversation</code>.</div>
105 <dt><a href="../edu/uci/iotproject/trafficreassembly/layer3/Conversation.Direction.html" title="enum in edu.uci.iotproject.trafficreassembly.layer3"><span class="typeNameLink">Conversation.Direction</span></a> - Enum in <a href="../edu/uci/iotproject/trafficreassembly/layer3/package-summary.html">edu.uci.iotproject.trafficreassembly.layer3</a></dt>
107 <div class="block">Utility enum for expressing the direction of a packet pertaining to this <code>Conversation</code>.</div>
109 <dt><span class="memberNameLink"><a href="../edu/uci/iotproject/analysis/TcpConversationUtils.html#countPacketLengthFrequencies-edu.uci.iotproject.trafficreassembly.layer3.Conversation-">countPacketLengthFrequencies(Conversation)</a></span> - Static method in class edu.uci.iotproject.analysis.<a href="../edu/uci/iotproject/analysis/TcpConversationUtils.html" title="class in edu.uci.iotproject.analysis">TcpConversationUtils</a></dt>
111 <div class="block">Given a <a href="../edu/uci/iotproject/trafficreassembly/layer3/Conversation.html" title="class in edu.uci.iotproject.trafficreassembly.layer3"><code>Conversation</code></a>, counts the frequencies of each unique packet length seen as part of the
112 <code>Conversation</code>.</div>
114 <dt><span class="memberNameLink"><a href="../edu/uci/iotproject/analysis/TcpConversationUtils.html#countPacketLengthFrequencies-java.util.Collection-">countPacketLengthFrequencies(Collection<Conversation>)</a></span> - Static method in class edu.uci.iotproject.analysis.<a href="../edu/uci/iotproject/analysis/TcpConversationUtils.html" title="class in edu.uci.iotproject.analysis">TcpConversationUtils</a></dt>
116 <div class="block">Like <a href="../edu/uci/iotproject/analysis/TcpConversationUtils.html#countPacketLengthFrequencies-edu.uci.iotproject.trafficreassembly.layer3.Conversation-"><code>TcpConversationUtils.countPacketLengthFrequencies(Conversation)</code></a>, but counts packet length frequencies for a collection
117 of <code>Conversation</code>s, i.e., the frequency of a packet length becomes the total number of packets with that
118 length across <em>all</em> <code>Conversation</code>s in <code>conversations</code>.</div>
120 <dt><span class="memberNameLink"><a href="../edu/uci/iotproject/analysis/TcpConversationUtils.html#countPacketPairFrequencies-java.util.Collection-">countPacketPairFrequencies(Collection<PcapPacketPair>)</a></span> - Static method in class edu.uci.iotproject.analysis.<a href="../edu/uci/iotproject/analysis/TcpConversationUtils.html" title="class in edu.uci.iotproject.analysis">TcpConversationUtils</a></dt>
122 <dt><span class="memberNameLink"><a href="../edu/uci/iotproject/analysis/TcpConversationUtils.html#countPacketPairFrequenciesByHostname-java.util.Collection-edu.uci.iotproject.DnsMap-">countPacketPairFrequenciesByHostname(Collection<Conversation>, DnsMap)</a></span> - Static method in class edu.uci.iotproject.analysis.<a href="../edu/uci/iotproject/analysis/TcpConversationUtils.html" title="class in edu.uci.iotproject.analysis">TcpConversationUtils</a></dt>
124 <dt><span class="memberNameLink"><a href="../edu/uci/iotproject/analysis/TcpConversationUtils.html#countPacketSequenceFrequencies-java.util.Collection-">countPacketSequenceFrequencies(Collection<Conversation>)</a></span> - Static method in class edu.uci.iotproject.analysis.<a href="../edu/uci/iotproject/analysis/TcpConversationUtils.html" title="class in edu.uci.iotproject.analysis">TcpConversationUtils</a></dt>
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